Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913915.1_cds_XP_016463923.1_57001
CDS Infomation

[gene=LOC107786921] [db_xref=GeneID:107786921] [protein=serine/threonine-protein kinase CDG1-like] [protein_id=XP_016463923.1] [location=complement(join(13972..14199,15314..15574,15673..15788,15896..16345,16784..17353,19642..19738))] [gbkey=CDS]
Sequence

ATGGTTGTAGTTAAGACACTGTTGTTTTTCCAACTATGTGTTATTTTTCCTCTCACCTTT
TTTGTTGCTGTTTCACTGGCTTCCCCAGAAGACCCAGATTGTAGGCTCAACTTCACCTCA
TCACCGTACAAACCAAGTGGGGAATGCCTTGCAGCTAATCAAGAAAACATCAATGAATGG
GACAGTTTCCCCACCACAAGATGCTGCCAAAATGTCCTCAACTTCTTCTCACAAGCATTG
GCCAAACAGGCAATTACTCAACAAGGAAACCTCTTCCTCCAGCAAGATCAATGGGAACAT
TGCTCTGGACCCTTTAAGCACCAGCCTTCTGTTTCGATTGAAAATTGTGGCTTTGGTTCC
CTTTATCAAGAAAGCAGCAAATGTTCTAGTCTATCTTTGACAAATGTTTTACAGGATGAC
AATTTTAACGATGTCAGGGACAAGTGCACTGGTTTTGGTTCCTCGTTCGATGATGCTTGC
AGGAAATGTACTGGTGCCATCAAATCTGCAAGGGATCATTACTTGGATCAGTTTTATGCC
AGAGATAATGATACTGAGAGAGCTACTTGTGTTATGGCTGTTGTTATTTCGGTTGCTACC
ACAAAATTAAATGATCCCTCTTCTATGGATGATTTCTTCTCCTGTTTACCAGCATTAAAC
TCTTTAGATTCTTTAGCGAAAGCATTGATTGCAATCGTTTTAGCAGCATTTGGGATGATA
ATGGTGATCATGCTAGTTAAGTATGTAACAAGAAATGCTAGAGCTGGACGAAAGCTTGCT
CTTTCAAAACCAAAGGAATTTGCTTCTTGCCCAGGTCTATATAGTTTCTCCAAAGCTGAG
ATTGAAAACGCGATAAATTTTGGGGAGGAGAAGAAATTTCTGGGACGTGGTAGTGCAGGG
CAAGTGTTCAAAGGGATTCTACCAAGTGGACAAGTAGTTGCTATCAAGCAAATATATAGA
AGTAATACCTCCGATTCTTTTACCCGAGAACTCCAGAATCTTTCCAGAGTCAGACATCCT
AATCTTGTTTGCCTCTTTGGTTGTTGCATTGAGGATGGAGAGCAATATTTAGTCTATGAG
TTTTGCTCTGCTGGAAATCTAGCTCAACATCTTTTGAGGAAAGACAAGGTCTTAACTTGG
AAACAAAGAGTAAATATTTTGAGAGATTGTGCACTTGCATTGAGATATCTCCACCACAAC
ATAGATGGCTGCATTGTTCACAGAGATATTAAGCTTACAAATATCCTGTTAACTGAGGAT
TTGCAACCAAAGCTATCAGATTTTGGGTTGGCAAGGATGATGGGAATGGAGGAGAGCAAA
GTGTTTACAGATGTTATAGGAACAATAGGATATATGGATCCTGAATATATGAGTAATGCC
AAGTTGACTTGTGCAAGTGACATTTATAGCTTTGGTATTGTAACTTTACAGGTTCTTTCT
GGCCAGAAAGTGATTGAACTTGATTTGGATGCCAGAGATCAACTAACAAGAAAGGCAAAG
GACGTGAGCATGGGTAAAAGGCCTCTAAAAGACTTTGAGGACCCTAGGCTTAAAGGGCAG
CTCAACAGTGTTGATTTCGAGTCCATTCTCCAAATTGCAGTGCTTTGTGTTGCCAAATCA
AGCAAAGGCCGTCCCACTATTGAAGTTGTGTTCGAAGAGATGGACAAAGTCTGGAAAAAC
ACATCGTCTGACGAGGTAATCAAAAACAAGAAAACACTTTGA

Peptide Sequence

PEP ID

XP_016463923.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase CDG1-like [Nicotiana tabacum]
Sequence

MVVVKTLLFFQLCVIFPLTFFVAVSLASPEDPDCRLNFTSSPYKPSGECLAANQENINEW
DSFPTTRCCQNVLNFFSQALAKQAITQQGNLFLQQDQWEHCSGPFKHQPSVSIENCGFGS
LYQESSKCSSLSLTNVLQDDNFNDVRDKCTGFGSSFDDACRKCTGAIKSARDHYLDQFYA
RDNDTERATCVMAVVISVATTKLNDPSSMDDFFSCLPALNSLDSLAKALIAIVLAAFGMI
MVIMLVKYVTRNARAGRKLALSKPKEFASCPGLYSFSKAEIENAINFGEEKKFLGRGSAG
QVFKGILPSGQVVAIKQIYRSNTSDSFTRELQNLSRVRHPNLVCLFGCCIEDGEQYLVYE
FCSAGNLAQHLLRKDKVLTWKQRVNILRDCALALRYLHHNIDGCIVHRDIKLTNILLTED
LQPKLSDFGLARMMGMEESKVFTDVIGTIGYMDPEYMSNAKLTCASDIYSFGIVTLQVLS
GQKVIELDLDARDQLTRKAKDVSMGKRPLKDFEDPRLKGQLNSVDFESILQIAVLCVAKS
SKGRPTIEVVFEEMDKVWKNTSSDEVIKNKKTL

Transcript Sequence

Gene sequence data has not been registered.